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Eleven grand challenges in single-cell data science
D Lähnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ...
Genome biology 21 (1), 1-35, 2020
9052020
Genomic and bioinformatic profiling of mutational neoepitopes reveals new rules to predict anticancer immunogenicity
F Duan, J Duitama, S Al Seesi, CM Ayres, SA Corcelli, AP Pawashe, ...
Journal of Experimental Medicine 211 (11), 2231-2248, 2014
4212014
Key parameters of tumor epitope immunogenicity revealed through a consortium approach improve neoantigen prediction
DK Wells, MM van Buuren, KK Dang, VM Hubbard-Lucey, KCF Sheehan, ...
Cell 183 (3), 818-834. e13, 2020
3182020
Selecting forwarding neighbors in wireless ad hoc networks
G Călinescu, I Măndoiu, PJ Wan, A Zelikovsky
Proceedings of the 5th international workshop on Discrete algorithms and …, 2001
2542001
Estimation of alternative splicing isoform frequencies from RNA-Seq data
M Nicolae, S Mangul, II Măndoiu, A Zelikovsky
Algorithms for molecular biology 6, 1-13, 2011
2492011
Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development
MB Renfree, AT Papenfuss, JE Deakin, J Lindsay, T Heider, K Belov, ...
Genome biology 12 (8), 1-26, 2011
2032011
Inferring viral quasispecies spectra from 454 pyrosequencing reads
I Astrovskaya, B Tork, S Mangul, K Westbrooks, I Măndoiu, P Balfe, ...
BMC bioinformatics 12 (6), 1-10, 2011
1502011
Symmetric connectivity with minimum power consumption in radio networks
G Călinescu, II Măndoiu, A Zelikovsky
Foundations of Information Technology in the Era of Network and Mobile …, 2002
1452002
Power efficient range assignment in ad-hoc wireless networks
E Althaus, G Calinescu, II Mandoiu, S Prasad, N Tchervenski, ...
2003 IEEE Wireless Communications and Networking, 2003. WCNC 2003. 3, 1889-1894, 2003
1142003
Power efficient range assignment for symmetric connectivity in static ad hoc wireless networks
E Althaus, G Călinescu, II Măndoiu, S Prasad, N Tchervenski, ...
Wireless Networks 12, 287-299, 2006
1112006
Highly scalable algorithms for rectilinear and octilinear Steiner trees
AB Kahng, II Măndoiu, AZ Zelikovsky
Proceedings of the 2003 Asia and South Pacific Design Automation Conference …, 2003
1082003
Lecture notes in computer science (including subseries lecture notes in artificial intelligence and lecture notes in bioinformatics): Preface
M Abe, K Aoki, G Ateniese, R Avanzi, Z Beerliová, O Billet, A Biryukov, ...
Lecture Notes in Computer Science (including subseries Lecture Notes in …, 2006
87*2006
Identification of mammalian orthologs using local synteny
J Jun, II Mandoiu, CE Nelson
BMC genomics 10 (1), 1-13, 2009
852009
Non-tree routing for reliability and yield improvement
AB Kahng, B Liu, II Mǎandoiu
Proceedings of the 2002 IEEE/ACM international conference on Computer-aided …, 2002
802002
The Y architecture for on-chip interconnect: analysis and methodology
H Chen, CK Cheng, AB Kahng, II Mandoiu, Q Wang, B Yao
IEEE Transactions on Computer-Aided Design of Integrated Circuits and …, 2005
742005
DNA-BAR: distinguisher selection for DNA barcoding
B DasGupta, KM Konwar, II Măndoiu, AA Shvartsman
Bioinformatics 21 (16), 3424-3426, 2005
632005
Area under the curve as a tool to measure kinetics of tumor growth in experimental animals
F Duan, S Simeone, R Wu, J Grady, I Mandoiu, PK Srivastava
Journal of immunological methods 382 (1-2), 224-228, 2012
622012
Minimum multicolored subgraph problem in multiplex PCR primer set selection and population haplotyping
MT Hajiaghayi, K Jain, LC Lau, II Măndoiu, A Russell, VV Vazirani
Computational Science–ICCS 2006: 6th International Conference, Reading, UK …, 2006
61*2006
Bootstrap-based differential gene expression analysis for RNA-Seq data with and without replicates
S Al Seesi, YT Tiagueu, A Zelikovsky, II Măndoiu
BMC genomics 15 (8), 1-10, 2014
602014
Towards accurate detection and genotyping of expressed variants from whole transcriptome sequencing data
J Duitama, PK Srivastava, II Măndoiu
BMC genomics 13, 1-10, 2012
602012
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