|ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks|
G Bindea, B Mlecnik, H Hackl, P Charoentong, M Tosolini, A Kirilovsky, ...
Bioinformatics 25 (8), 1091-1093, 2009
|Pan-cancer immunogenomic analyses reveal genotype-immunophenotype relationships and predictors of response to checkpoint blockade|
P Charoentong, F Finotello, M Angelova, C Mayer, M Efremova, D Rieder, ...
Cell reports 18 (1), 248-262, 2017
|Molecular and pharmacological modulators of the tumor immune contexture revealed by deconvolution of RNA-seq data|
F Finotello, C Mayer, C Plattner, G Laschober, D Rieder, H Hackl, ...
Genome medicine 11 (1), 1-20, 2019
|Characterization of the immunophenotypes and antigenomes of colorectal cancers reveals distinct tumor escape mechanisms and novel targets for immunotherapy|
M Angelova, P Charoentong, H Hackl, ML Fischer, R Snajder, ...
Genome biology 16, 1-17, 2015
|Computational genomics tools for dissecting tumour–immune cell interactions|
H Hackl, P Charoentong, F Finotello, Z Trajanoski
Nature Reviews Genetics 17 (8), 441-458, 2016
|Lipocalin 2 protects from inflammation and tumorigenesis associated with gut microbiota alterations|
AR Moschen, RR Gerner, J Wang, V Klepsch, TE Adolph, SJ Reider, ...
Cell host & microbe 19 (4), 455-469, 2016
|Targeting immune checkpoints potentiates immunoediting and changes the dynamics of tumor evolution|
M Efremova, D Rieder, V Klepsch, P Charoentong, F Finotello, H Hackl, ...
Nature communications 9 (1), 32, 2018
|PathwayExplorer: web service for visualizing high-throughput expression data on biological pathways|
B Mlecnik, M Scheideler, H Hackl, J Hartler, F Sanchez-Cabo, ...
Nucleic acids research 33 (suppl_2), W633-W637, 2005
|Piezo1 forms mechanosensitive ion channels in the human MCF-7 breast cancer cell line|
C Li, S Rezania, S Kammerer, A Sokolowski, T Devaney, A Gorischek, ...
Scientific reports 5 (1), 1-9, 2015
|Signatures of CD8+ T cell dysfunction in AML patients and their reversibility with response to chemotherapy|
HA Knaus, S Berglund, H Hackl, AL Blackford, JF Zeidner, ...
JCI insight 3 (21), 2018
|Comparative transcriptomics of human multipotent stem cells during adipogenesis and osteoblastogenesis|
M Scheideler, C Elabd, LE Zaragosi, C Chiellini, H Hackl, ...
BMC genomics 9 (1), 1-14, 2008
|The human placental sexome differs between trophoblast epithelium and villous vessel endothelium|
S Cvitic, MS Longtine, H Hackl, K Wagner, MD Nelson, G Desoye, ...
PloS one 8 (10), e79233, 2013
|Next-generation computational tools for interrogating cancer immunity|
F Finotello, D Rieder, H Hackl, Z Trajanoski
Nature Reviews Genetics 20 (12), 724-746, 2019
|Grape-seed derived procyanidins interfere with adipogenesis of 3T3-L1 cells at the onset of differentiation|
M Pinent, MC Bladé, MJ Salvadó, L Arola, H Hackl, J Quackenbush, ...
International journal of obesity 29 (8), 934-941, 2005
|Molecular and genetic alterations associated with therapy resistance and relapse of acute myeloid leukemia|
H Hackl, K Astanina, R Wieser
Journal of Hematology & Oncology 10 (1), 1-16, 2017
|Molecular processes during fat cell development revealed by gene expression profiling and functional annotation|
H Hackl, TR Burkard, A Sturn, R Rubio, A Schleiffer, S Tian, ...
Genome biology 6, 1-23, 2005
|High STAT1 mRNA levels but not its tyrosine phosphorylation are associated with macrophage infiltration and bad prognosis in breast cancer|
P Tymoszuk, P Charoentong, H Hackl, R Spilka, E Müller-Holzner, ...
BMC cancer 14 (1), 1-13, 2014
|MARS: microarray analysis, retrieval, and storage system|
M Maurer, R Molidor, A Sturn, J Hartler, H Hackl, G Stocker, A Prokesch, ...
BMC bioinformatics 6, 1-12, 2005
|A modified scoring of the NCCN‐IPI is more accurate in the elderly and is improved by albumin and β2‐microglobulin|
T Melchardt, K Troppan, L Weiss, C Hufnagl, D Neureiter, ...
British journal of haematology 168 (2), 239-245, 2015
|Impact of antibiotic treatment on immune-checkpoint blockade efficacy in advanced non-squamous non-small cell lung cancer|
F Huemer, G Rinnerthaler, T Westphal, H Hackl, G Hutarew, ...
Oncotarget 9 (23), 16512, 2018