| RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays JC Marioni, CE Mason, SM Mane, M Stephens, Y Gilad Genome research 18 (9), 1509-1517, 2008 | 3525 | 2008 |
| Initial sequence of the chimpanzee genome and comparison with the human genome Chimpanzee Sequencing and Analysis Consortium Waterson Robert H. waterston ... Nature 437 (7055), 69-87, 2005 | 2315 | 2005 |
| Understanding mechanisms underlying human gene expression variation with RNA sequencing JK Pickrell, JC Marioni, AA Pai, JF Degner, BE Engelhardt, E Nkadori, ... Nature 464 (7289), 768-772, 2010 | 1561 | 2010 |
| DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines JT Bell, AA Pai, JK Pickrell, DJ Gaffney, R Pique-Regi, JF Degner, Y Gilad, ... Genome biology 12, 1-13, 2011 | 1013 | 2011 |
| Sex-specific genetic architecture of human disease C Ober, DA Loisel, Y Gilad Nature Reviews Genetics 9 (12), 911-922, 2008 | 826 | 2008 |
| DNase I sensitivity QTLs are a major determinant of human expression variation JF Degner, AA Pai, R Pique-Regi, JB Veyrieras, DJ Gaffney, JK Pickrell, ... Nature 482 (7385), 390-394, 2012 | 810 | 2012 |
| High-resolution mapping of expression-QTLs yields insight into human gene regulation JB Veyrieras, S Kudaravalli, SY Kim, ET Dermitzakis, Y Gilad, M Stephens, ... PLoS genetics 4 (10), e1000214, 2008 | 681 | 2008 |
| Accurate inference of transcription factor binding from DNA sequence and chromatin accessibility data R Pique-Regi, JF Degner, AA Pai, DJ Gaffney, Y Gilad, JK Pritchard Genome research 21 (3), 447-455, 2011 | 663 | 2011 |
| Revealing the architecture of gene regulation: the promise of eQTL studies Y Gilad, SA Rifkin, JK Pritchard Trends in genetics 24 (8), 408-415, 2008 | 662 | 2008 |
| RNA splicing is a primary link between genetic variation and disease YI Li, B Van De Geijn, A Raj, DA Knowles, AA Petti, D Golan, Y Gilad, ... Science 352 (6285), 600-604, 2016 | 661 | 2016 |
| Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data JF Degner, JC Marioni, AA Pai, JK Pickrell, E Nkadori, Y Gilad, ... Bioinformatics 25 (24), 3207-3212, 2009 | 633 | 2009 |
| WASP: allele-specific software for robust molecular quantitative trait locus discovery B Van De Geijn, G McVicker, Y Gilad, JK Pritchard Nature methods 12 (11), 1061-1063, 2015 | 564 | 2015 |
| Comparative studies of gene expression and the evolution of gene regulation IG Romero, I Ruvinsky, Y Gilad Nature Reviews Genetics 13 (7), 505-516, 2012 | 536 | 2012 |
| Identification of genetic variants that affect histone modifications in human cells G McVicker, B Van De Geijn, JF Degner, CE Cain, NE Banovich, A Raj, ... Science 342 (6159), 747-749, 2013 | 516 | 2013 |
| Impact of regulatory variation from RNA to protein A Battle, Z Khan, SH Wang, A Mitrano, MJ Ford, JK Pritchard, Y Gilad Science 347 (6222), 664-667, 2015 | 514 | 2015 |
| Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates Y Gilad, V Wiebe, M Przeworski, D Lancet, S Pääbo PLoS biology 2 (1), e5, 2004 | 506 | 2004 |
| RNA-seq: impact of RNA degradation on transcript quantification I Gallego Romero, AA Pai, J Tung, Y Gilad BMC biology 12, 1-13, 2014 | 505 | 2014 |
| Genome-Wide Association Study in Asian Populations Identifies Variants in ETS1 and WDFY4 Associated with Systemic Lupus Erythematosus W Yang, N Shen, DQ Ye, Q Liu, Y Zhang, XX Qian, N Hirankarn, D Ying, ... PLoS genetics 6 (2), e1000841, 2010 | 461 | 2010 |
| Taxonomic classification of bacterial 16S rRNA genes using short sequencing reads: evaluation of effective study designs O Mizrahi-Man, ER Davenport, Y Gilad PloS one 8 (1), e53608, 2013 | 407 | 2013 |
| Expression profiling in primates reveals a rapid evolution of human transcription factors Y Gilad, A Oshlack, GK Smyth, TP Speed, KP White Nature 440 (7081), 242-245, 2006 | 396 | 2006 |
