| Cistrome Data Browser: expanded datasets and new tools for gene regulatory analysis R Zheng, C Wan, S Mei, Q Qin, Q Wu, H Sun, CH Chen, M Brown, ... Nucleic acids research 47 (D1), D729-D735, 2019 | 664 | 2019 |
| Cistrome Data Browser: a data portal for ChIP-Seq and chromatin accessibility data in human and mouse S Mei, Q Qin, Q Wu, H Sun, R Zheng, C Zang, M Zhu, J Wu, X Shi, L Taing, ... Nucleic acids research, gkw983, 2016 | 509 | 2016 |
| Target analysis by integration of transcriptome and ChIP-seq data with BETA S Wang, H Sun, J Ma, C Zang, C Wang, J Wang, Q Tang, CA Meyer, ... Nature protocols 8 (12), 2502-2515, 2013 | 489 | 2013 |
| Lisa: inferring transcriptional regulators through integrative modeling of public chromatin accessibility and ChIP-seq data Q Qin, J Fan, R Zheng, C Wan, S Mei, Q Wu, H Sun, M Brown, J Zhang, ... Genome biology 21, 1-14, 2020 | 203 | 2020 |
| JARID1B is a luminal lineage-driving oncogene in breast cancer S Yamamoto, Z Wu, HG Russnes, S Takagi, G Peluffo, C Vaske, X Zhao, ... Cancer cell 25 (6), 762-777, 2014 | 196 | 2014 |
| VIPER: Visualization Pipeline for RNA-seq, a Snakemake workflow for efficient and complete RNA-seq analysis MI Cornwell, M Vangala, L Taing, Z Herbert, J Köster, B Li, H Sun, T Li, ... BMC bioinformatics 19, 1-14, 2018 | 187 | 2018 |
| ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline Q Qin, S Mei, Q Wu, H Sun, L Li, L Taing, S Chen, F Li, T Liu, C Zang, ... BMC bioinformatics 17, 1-13, 2016 | 105 | 2016 |
| BSeQC: quality control of bisulfite sequencing experiments X Lin, D Sun, B Rodriguez, Q Zhao, H Sun, Y Zhang, W Li Bioinformatics 29 (24), 3227-3229, 2013 | 54 | 2013 |
| CR Cistrome: a ChIP-Seq database for chromatin regulators and histone modification linkages in human and mouse Q Wang, J Huang, H Sun, J Liu, J Wang, Q Wang, Q Qin, S Mei, C Zhao, ... Nucleic acids research 42 (D1), D450-D458, 2014 | 49 | 2014 |
| RubyStar: A Non-Task-Oriented Mixture Model Dialog System H Liu, T Lin, H Sun, W Lin, CW Chang, T Zhong, A Rudnicky | 32 | 2017 |
| CistromeFinder for ChIP-seq and DNase-seq data reuse H Sun, B Qin, T Liu, Q Wang, J Liu, J Wang, X Lin, Y Yang, L Taing, ... Bioinformatics 29 (10), 1352-1354, 2013 | 23 | 2013 |
| Unsupervised typography transfer H Sun, Y Luo, Z Lu arXiv preprint arXiv:1802.02595, 2018 | 6 | 2018 |
