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Yang Shen
Yang Shen
Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases
Bestätigte E-Mail-Adresse bei niddk.nih.gov
Titel
Zitiert von
Zitiert von
Jahr
TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts
Y Shen, F Delaglio, G Cornilescu, A Bax
Journal of biomolecular NMR 44 (4), 213-223, 2009
28062009
Protein backbone and sidechain torsion angles predicted from NMR chemical shifts using artificial neural networks
Y Shen, A Bax
Journal of biomolecular NMR 56 (3), 227-241, 2013
10762013
Consistent blind protein structure generation from NMR chemical shift data
Y Shen, O Lange, F Delaglio, P Rossi, JM Aramini, G Liu, A Eletsky, Y Wu, ...
Proceedings of the National Academy of Sciences 105 (12), 4685-4690, 2008
9242008
SPARTA+: a modest improvement in empirical NMR chemical shift prediction by means of an artificial neural network
Y Shen, A Bax
Journal of biomolecular NMR 48 (1), 13-22, 2010
5482010
Protein backbone chemical shifts predicted from searching a database for torsion angle and sequence homology
Y Shen, A Bax
Journal of biomolecular NMR 38 (4), 289-302, 2007
3552007
De novo protein structure generation from incomplete chemical shift assignments
Y Shen, R Vernon, D Baker, A Bax
Journal of biomolecular NMR 43 (2), 63-78, 2009
3072009
Protein Structural Information Derived from NMR Chemical Shift with the Neural Network Program TALOS-N
Y Shen, A Bax
Artificial neural networks, 17-32, 2015
2232015
Monomeric Aβ1–40 and Aβ1–42 Peptides in Solution Adopt Very Similar Ramachandran Map Distributions That Closely Resemble Random Coil
J Roche, Y Shen, JH Lee, J Ying, A Bax
Biochemistry 55 (5), 762-775, 2016
1872016
Prediction of Xaa-Pro peptide bond conformation from sequence and chemical shifts
Y Shen, A Bax
Journal of biomolecular NMR 46 (3), 199-204, 2010
1672010
Simultaneous prediction of protein folding and docking at high resolution
R Das, I André, Y Shen, Y Wu, A Lemak, S Bansal, CH Arrowsmith, ...
Proceedings of the National Academy of Sciences 106 (45), 18978-18983, 2009
1662009
NMR data collection and analysis protocol for high-throughput protein structure determination
G Liu, Y Shen, HS Atreya, D Parish, Y Shao, DK Sukumaran, R Xiao, ...
Proceedings of the National Academy of Sciences 102 (30), 10487-10492, 2005
1452005
Identification of helix capping and β-turn motifs from NMR chemical shifts
Y Shen, A Bax
Journal of biomolecular NMR 52 (3), 211-232, 2012
1082012
De novo structure generation using chemical shifts for proteins with high‐sequence identity but different folds
Y Shen, PN Bryan, Y He, J Orban, D Baker, A Bax
Protein Science 19 (2), 349-356, 2010
792010
A maximum entropy approach to the study of residue‐specific backbone angle distributions in α‐synuclein, an intrinsically disordered protein
AB Mantsyzov, AS Maltsev, J Ying, Y Shen, G Hummer, A Bax
Protein Science 23 (9), 1275-1290, 2014
742014
G-matrix Fourier transform NOESY-based protocol for high-quality protein structure determination
Y Shen, HS Atreya, G Liu, T Szyperski
Journal of the American Chemical Society 127 (25), 9085-9099, 2005
722005
Homology modeling of larger proteins guided by chemical shifts
Y Shen, A Bax
Nature Methods 12, 747–750, 2015
542015
Improved chemical shift based fragment selection for CS-Rosetta using Rosetta3 fragment picker
R Vernon, Y Shen, D Baker, OF Lange
Journal of biomolecular NMR 57 (2), 117-127, 2013
472013
Building native protein conformation from NMR backbone chemical shifts using Monte Carlo fragment assembly
H Gong, Y Shen, GD Rose
Protein Science 16 (8), 1515-1521, 2007
442007
MERA: a webserver for evaluating backbone torsion angle distributions in dynamic and disordered proteins from NMR data
AB Mantsyzov, Y Shen, JH Lee, G Hummer, A Bax
Journal of biomolecular NMR 63 (1), 85-95, 2015
432015
Remarkable Rigidity of the Single α-Helical Domain of Myosin-VI As Revealed by NMR Spectroscopy
CA Barnes, Y Shen, J Ying, Y Takagi, DA Torchia, JR Sellers, A Bax
Journal of the American Chemical Society, 2019
412019
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