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Cistrome Data Browser: expanded datasets and new tools for gene regulatory analysis R Zheng, C Wan, S Mei, Q Qin, Q Wu, H Sun, CH Chen, M Brown, ... Nucleic acids research 47 (D1), D729-D735, 2019 | 666 | 2019 |
Cistrome Data Browser: a data portal for ChIP-Seq and chromatin accessibility data in human and mouse S Mei, Q Qin, Q Wu, H Sun, R Zheng, C Zang, M Zhu, J Wu, X Shi, L Taing, ... Nucleic acids research, gkw983, 2016 | 509 | 2016 |
Integrative analysis of pooled CRISPR genetic screens using MAGeCKFlute B Wang, M Wang, W Zhang, T Xiao, CH Chen, A Wu, F Wu, N Traugh, ... Nature protocols 14 (3), 756-780, 2019 | 333 | 2019 |
Streptococcal pyrogenic exotoxin B cleaves GSDMA and triggers pyroptosis W Deng, Y Bai, F Deng, Y Pan, S Mei, Z Zheng, R Min, Z Wu, W Li, R Miao, ... Nature 602 (7897), 496-502, 2022 | 233 | 2022 |
UVR8 interacts with BES1 and BIM1 to regulate transcription and photomorphogenesis in Arabidopsis T Liang, S Mei, C Shi, Y Yang, Y Peng, L Ma, F Wang, X Li, X Huang, ... Developmental cell 44 (4), 512-523. e5, 2018 | 219 | 2018 |
Lisa: inferring transcriptional regulators through integrative modeling of public chromatin accessibility and ChIP-seq data Q Qin, J Fan, R Zheng, C Wan, S Mei, Q Wu, H Sun, M Brown, J Zhang, ... Genome biology 21, 1-14, 2020 | 203 | 2020 |
Human prostate cancer bone metastases have an actionable immunosuppressive microenvironment Y Kfoury, N Baryawno, N Severe, S Mei, K Gustafsson, T Hirz, T Brouse, ... Cancer cell 39 (11), 1464-1478. e8, 2021 | 154 | 2021 |
Single-cell transcriptomics of human embryos identifies multiple sympathoblast lineages with potential implications for neuroblastoma origin P Kameneva, AV Artemov, ME Kastriti, L Faure, TK Olsen, J Otte, ... Nature genetics 53 (5), 694-706, 2021 | 142 | 2021 |
The lysosomal Rag-Ragulator complex licenses RIPK1– and caspase-8–mediated pyroptosis by Yersinia Z Zheng, W Deng, Y Bai, R Miao, S Mei, Z Zhang, Y Pan, Y Wang, R Min, ... Science 372 (6549), eabg0269, 2021 | 132 | 2021 |
An integrative ENCODE resource for cancer genomics J Zhang, D Lee, V Dhiman, P Jiang, J Xu, P McGillivray, H Yang, J Liu, ... Nature communications 11 (1), 3696, 2020 | 131 | 2020 |
Cistrome cancer: a web resource for integrative gene regulation modeling in cancer S Mei, CA Meyer, R Zheng, Q Qin, Q Wu, P Jiang, B Li, X Shi, B Wang, ... Cancer research 77 (21), e19-e22, 2017 | 127 | 2017 |
CLK2 is an oncogenic kinase and splicing regulator in breast cancer T Yoshida, JH Kim, K Carver, Y Su, S Weremowicz, L Mulvey, ... Cancer research 75 (7), 1516-1526, 2015 | 106 | 2015 |
ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline Q Qin, S Mei, Q Wu, H Sun, L Li, L Taing, S Chen, F Li, T Liu, C Zang, ... BMC bioinformatics 17, 1-13, 2016 | 105 | 2016 |
Pharmacological inhibition of β-catenin/BCL9 interaction overcomes resistance to immune checkpoint blockades by modulating Treg cells M Feng, JQ Jin, L Xia, T Xiao, S Mei, X Wang, X Huang, J Chen, M Liu, ... Science advances 5 (5), eaau5240, 2019 | 98 | 2019 |
Dissecting the immune suppressive human prostate tumor microenvironment via integrated single-cell and spatial transcriptomic analyses T Hirz, S Mei, H Sarkar, Y Kfoury, S Wu, BM Verhoeven, AO Subtelny, ... Nature Communications 14 (1), 663, 2023 | 93 | 2023 |
Modeling cis-regulation with a compendium of genome-wide histone H3K27ac profiles S Wang, C Zang, T Xiao, J Fan, S Mei, Q Qin, Q Wu, X Li, K Xu, HH He, ... Genome research 26 (10), 1417-1429, 2016 | 88 | 2016 |
Pharmacological activation of estrogen receptor beta augments innate immunity to suppress cancer metastasis L Zhao, S Huang, S Mei, Z Yang, L Xu, N Zhou, Q Yang, Q Shen, W Wang, ... Proceedings of the National Academy of Sciences 115 (16), E3673-E3681, 2018 | 74 | 2018 |
CRISPR-DO for genome-wide CRISPR design and optimization J Ma, J Köster, Q Qin, S Hu, W Li, C Chen, Q Cao, J Wang, S Mei, Q Liu, ... Bioinformatics 32 (21), 3336-3338, 2016 | 64 | 2016 |
Upper cortical layer–driven network impairment in schizophrenia MY Batiuk, T Tyler, K Dragicevic, S Mei, R Rydbirk, V Petukhov, ... Science advances 8 (41), eabn8367, 2022 | 63* | 2022 |