| Enhancer control of transcriptional bursting T Fukaya, B Lim, M Levine Cell 166 (2), 358-368, 2016 | 738 | 2016 |
| Visualization of transvection in living Drosophila embryos B Lim, T Heist, M Levine, T Fukaya Molecular cell 70 (2), 287-296. e6, 2018 | 177 | 2018 |
| Zelda potentiates morphogen activity by increasing chromatin accessibility SM Foo, Y Sun, B Lim, R Ziukaite, K O’Brien, CY Nien, N Kirov, ... Current Biology 24 (12), 1341-1346, 2014 | 151 | 2014 |
| Enhancer-promoter communication: hubs or loops? B Lim, MS Levine Current opinion in genetics & development 67, 5-9, 2021 | 108 | 2021 |
| Rapid rates of Pol II elongation in the Drosophila embryo T Fukaya, B Lim, M Levine Current Biology 27 (9), 1387-1391, 2017 | 93 | 2017 |
| Microfluidic trap array for massively parallel imaging of Drosophila embryos TJ Levario, M Zhan, B Lim, SY Shvartsman, H Lu Nature protocols 8 (4), 721-736, 2013 | 84 | 2013 |
| Gene regulation by MAPK substrate competition Y Kim, MJ Andreu, B Lim, K Chung, M Terayama, G Jiménez, CA Berg, ... Developmental cell 20 (6), 880-887, 2011 | 70 | 2011 |
| Kinetics of gene derepression by ERK signaling B Lim, N Samper, H Lu, C Rushlow, G Jiménez, SY Shvartsman Proceedings of the National Academy of Sciences 110 (25), 10330-10335, 2013 | 69 | 2013 |
| Dynamics of inductive ERK signaling in the Drosophila embryo B Lim, CJ Dsilva, TJ Levario, H Lu, T Schüpbach, IG Kevrekidis, ... Current Biology 25 (13), 1784-1790, 2015 | 67 | 2015 |
| Temporal dynamics of pair-rule stripes in living Drosophila embryos B Lim, T Fukaya, T Heist, M Levine Proceedings of the National Academy of Sciences 115 (33), 8376-8381, 2018 | 65 | 2018 |
| Pattern formation by graded and uniform signals in the early Drosophila embryo JS Kanodia, HL Liang, Y Kim, B Lim, M Zhan, H Lu, CA Rushlow, ... Biophysical Journal 102 (3), 427-433, 2012 | 64 | 2012 |
| Transcriptional pre-patterning of Drosophila gastrulation B Lim, M Levine, Y Yamazaki Current Biology 27 (2), 286-290, 2017 | 57 | 2017 |
| A systematic ensemble approach to thermodynamic modeling of gene expression from sequence data MAH Samee, B Lim, N Samper, H Lu, CA Rushlow, G Jiménez, ... Cell systems 1 (6), 396-407, 2015 | 47 | 2015 |
| Diverse heterochromatin-associated proteins repress distinct classes of genes and repetitive elements RL McCarthy, KE Kaeding, SH Keller, Y Zhong, L Xu, A Hsieh, Y Hou, ... Nature cell biology 23 (8), 905-914, 2021 | 44 | 2021 |
| The nuclear to cytoplasmic ratio directly regulates zygotic transcription in Drosophila through multiple modalities S Syed, H Wilky, J Raimundo, B Lim, AA Amodeo Proceedings of the National Academy of Sciences 118 (14), e2010210118, 2021 | 41 | 2021 |
| RTK signaling modulates the Dorsal gradient A Helman, B Lim, MJ Andreu, Y Kim, T Shestkin, H Lu, G Jiménez, ... Development 139 (16), 3032-3039, 2012 | 31 | 2012 |
| Temporal ordering and registration of images in studies of developmental dynamics CJ Dsilva, B Lim, H Lu, A Singer, IG Kevrekidis, SY Shvartsman Development 142 (9), 1717-1724, 2015 | 29 | 2015 |
| Regulation of spatiotemporal limits of developmental gene expression via enhancer grammar SH Keller, SG Jena, Y Yamazaki, B Lim Proceedings of the National Academy of Sciences 117 (26), 15096-15103, 2020 | 28 | 2020 |
| Imaging transcriptional dynamics B Lim Current opinion in biotechnology 52, 49-55, 2018 | 25 | 2018 |
| Calpain A modulates Toll responses by limited Cactus/IκB proteolysis M Fontenele, B Lim, D Oliveira, M Buffolo, DH Perlman, T Schupbach, ... Molecular biology of the cell 24 (18), 2966-2980, 2013 | 22 | 2013 |
