Boian S. Alexandrov
Boian S. Alexandrov
Theoretical Division, Los Alamos National Lab
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Zitiert von
Zitiert von
DNA breathing dynamics in the presence of a terahertz field
BS Alexandrov, V Gelev, AR Bishop, A Usheva, KØ Rasmussen
Physics Letters A 374 (10), 1214-1217, 2010
Mammalian stem cells reprogramming in response to terahertz radiation
J Bock, Y Fukuyo, S Kang, ML Phipps, LB Alexandrov, KØ Rasmussen, ...
PloS one 5 (12), e15806, 2010
Uncovering novel mutational signatures by de novo extraction with SigProfilerExtractor
SMA Islam, M Díaz-Gay, Y Wu, M Barnes, R Vangara, EN Bergstrom, ...
Cell genomics 2 (11), 2022
Nonnegative/binary matrix factorization with a d-wave quantum annealer
D O’Malley, VV Vesselinov, BS Alexandrov, LB Alexandrov
PloS one 13 (12), e0206653, 2018
Specificity and heterogeneity of terahertz radiation effect on gene expression in mouse mesenchymal stem cells
BS Alexandrov, ML Phipps, LB Alexandrov, LG Booshehri, A Erat, ...
Scientific reports 3 (1), 1184, 2013
A rare functional noncoding variant at the GWAS-implicated MIR137/MIR2682 locus might confer risk to schizophrenia and bipolar disorder
J Duan, J Shi, A Fiorentino, C Leites, X Chen, W Moy, J Chen, ...
The American Journal of Human Genetics 95 (6), 744-753, 2014
Non-thermal effects of terahertz radiation on gene expression in mouse stem cells
BS Alexandrov, KØ Rasmussen, AR Bishop, A Usheva, LB Alexandrov, ...
Biomedical Optics Express 2 (9), 2679-2689, 2011
A nonlinear dynamic model of DNA with a sequence-dependent stacking term
BS Alexandrov, V Gelev, Y Monisova, LB Alexandrov, AR Bishop, ...
Nucleic Acids Research 37 (7), 2405-2410, 2009
Unsupervised Phase Mapping of X-ray Diffraction Data by Nonnegative Matrix Factorization Integrated with Custom Clustering
ITBSA Valentin Stanev, Velimir V. Vesselinov, A. Gilad Kusne, Graham Antoszewski
npj Computational Materials 4 (43), 2018
DNA dynamics play a role as a basal transcription factor in the positioning and regulation of gene transcription initiation
BS Alexandrov, V Gelev, SW Yoo, LB Alexandrov, Y Fukuyo, AR Bishop, ...
Nucleic acids research 38 (6), 1790-1795, 2010
Temperature behavior of NaI (Tl) scintillation detectors
KD Ianakiev, BS Alexandrov, PB Littlewood, MC Browne
Nuclear Instruments and Methods in Physics Research Section A: Accelerators …, 2009
Contaminant source identification using semi-supervised machine learning
VV Vesselinov, BS Alexandrov, D O’Malley
Journal of contaminant hydrology 212, 134-142, 2018
Bubble statistics and dynamics in double-stranded DNA
BS Alexandrov, LT Wille, KØ Rasmussen, AR Bishop, KB Blagoev
Physical review E 74 (5), 050901, 2006
Blind source separation for groundwater pressure analysis based on nonnegative matrix factorization
BS Alexandrov, VV Vesselinov
Water Resources Research 50 (9), 7332-7347, 2014
DNA breathing dynamics distinguish binding from nonbinding consensus sites for transcription factor YY1 in cells
BS Alexandrov, Y Fukuyo, M Lange, N Horikoshi, V Gelev, ...
Nucleic acids research 40 (20), 10116-10123, 2012
Toward a detailed description of the thermally induced dynamics of the core promoter
BS Alexandrov, V Gelev, SW Yoo, AR Bishop, KØ Rasmussen, A Usheva
PLoS computational biology 5 (3), e1000313, 2009
Unsupervised machine learning based on non-negative tensor factorization for analyzing reactive-mixing
VV Vesselinov, MK Mudunuru, S Karra, D O'Malley, BS Alexandrov
Journal of Computational Physics 395, 85-104, 2019
Pre-melting dynamics of DNA and its relation to specific functions
B Alexandrov, NK Voulgarakis, KØ Rasmussen, A Usheva, AR Bishop
Journal of Physics: Condensed Matter 21 (3), 034107, 2008
Ultra-violet light induced changes in DNA dynamics may enhance TT-dimer recognition
KB Blagoev, BS Alexandrov, EH Goodwin, AR Bishop
DNA repair 5 (7), 863-867, 2006
Feigenbaum cascade of discrete breathers in a model of DNA
P Maniadis, BS Alexandrov, AR Bishop, KØ Rasmussen
Physical Review E 83 (1), 011904, 2011
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