Javier Diaz
Javier Diaz
Phenomic AI
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Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins
P Hu, SC Janga, M Babu, JJ Díaz-Mejía, G Butland, W Yang, O Pogoutse, ...
PLoS biology 7 (4), e1000096, 2009
eSGA: E. coli synthetic genetic array analysis
G Butland, M Babu, JJ Díaz-Mejía, F Bohdana, S Phanse, B Gold, W Yang, ...
Nature methods 5 (9), 789-795, 2008
Genetic Interaction Maps in Escherichia coli Reveal Functional Crosstalk among Cell Envelope Biogenesis Pathways
M Babu, JJ Díaz-Mejía, J Vlasblom, A Gagarinova, S Phanse, C Graham, ...
PLoS genetics 7 (11), e1002377, 2011
The Escherichia coli Phosphotyrosine Proteome Relates to Core Pathways and Virulence
AM Hansen, R Chaerkady, J Sharma, JJ Díaz-Mejía, N Tyagi, S Renuse, ...
PLoS pathogens 9 (6), e1003403, 2013
Failure of human rhombic lip differentiation underlies medulloblastoma formation
LD Hendrikse, P Haldipur, O Saulnier, J Millman, AH Sjoboen, ...
Nature 609 (7929), 1021-1028, 2022
Computational and experimental approaches to chart the Escherichia coli cell-envelope-associated proteome and interactome
JJ Díaz-Mejía, M Babu, A Emili
FEMS microbiology reviews 33 (1), 66-97, 2008
An analysis of the evolutionary relationships of integron integrases, with emphasis on the prevalence of class 1 integrons in Escherichia coli isolates from clinical and …
JJ Diaz-Mejia, CF Amabile-Cuevas, I Rosas, V Souza
Microbiology 154 (1), 94-102, 2008
Characterization of the NifA-RpoN Regulon in Rhizobium etli in Free Life and in Symbiosis with Phaseolus vulgaris
E Salazar, JJ Díaz-Mejía, G Moreno-Hagelsieb, G Martínez-Batallar, ...
Applied and environmental microbiology 76 (13), 4510-4520, 2010
Evaluation of methods to assign cell type labels to cell clusters from single-cell RNA-sequencing data
JJ Diaz-Mejia, EC Meng, AR Pico, SA MacParland, T Ketela, TJ Pugh, ...
F1000Research 8, 2019
A network perspective on the evolution of metabolism by gene duplication
JJ Díaz-Mejía, E Pérez-Rueda, L Segovia
Genome biology 8, 1-10, 2007
Network-based function prediction and interactomics: the case for metabolic enzymes
SC Janga, JJ Díaz-Mejía, G Moreno-Hagelsieb
Metabolic Engineering 13 (1), 1-10, 2011
The hidden universal distribution of amino acid biosynthetic networks: a genomic perspective on their origins and evolution
G Hernández-Montes, JJ Díaz-Mejía, E Pérez-Rueda, L Segovia
Genome biology 9, 1-15, 2008
Systems-level approaches for identifying and analyzing genetic interaction networks in Escherichia coli and extensions to other prokaryotes
M Babu, G Musso, JJ Díaz-Mejía, G Butland, JF Greenblatt, A Emili
Molecular BioSystems 5 (12), 1439-1455, 2009
Antitumor immune effects of preoperative sitravatinib and nivolumab in oral cavity cancer: SNOW window-of-opportunity study
M Oliva, D Chepeha, DV Araujo, JJ Diaz-Mejia, P Olson, A Prawira, ...
Journal for Immunotherapy of Cancer 9 (10), 2021
Mapping DNA damage‐dependent genetic interactions in yeast via party mating and barcode fusion genetics
JJ Díaz‐Mejía, A Celaj, JC Mellor, A Coté, A Balint, B Ho, P Bansal, ...
Molecular Systems Biology 14 (5), e7985, 2018
CReSCENT: cancer single cell expression toolkit
S Mohanraj, JJ Díaz-Mejía, MD Pham, H Elrick, M Husić, S Rashid, P Luo, ...
Nucleic Acids Research 48 (W1), W372-W379, 2020
Differential activities of the SoxR protein of Escherichia coli: SoxS is not required for gene activation under iron deprivation
AM Fuentes, JJ Díaz-Mejía, R Maldonado-Rodríguez, ...
FEMS microbiology letters 201 (2), 271-275, 2001
Antibiotic resistance in oral commensal streptococci from healthy Mexicans and Cubans: resistance prevalence does not mirror antibiotic usage
JJ Díaz-Mejía, A Carbajal-Saucedo, CF Amábile-Cuevas
FEMS Microbiology Letters 217 (2), 173-176, 2002
A comparison of data integration methods for single-cell RNA sequencing of cancer samples
LM Richards, M Riverin, S Mohanraj, S Ayyadhury, DC Croucher, ...
bioRxiv, 2021.08. 04.453579, 2021
Immunophenotypic correlates of sustained MRD negativity in patients with multiple myeloma
DG Coffey, F Maura, E Gonzalez-Kozlova, JJ Diaz-Mejia, P Luo, Y Zhang, ...
Nature communications 14 (1), 5335, 2023
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