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Laleh Haghverdi
Laleh Haghverdi
BIMSB-MDC
Bestätigte E-Mail-Adresse bei mdc-berlin.de - Startseite
Titel
Zitiert von
Zitiert von
Jahr
Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors
L Haghverdi, ATL Lun, MD Morgan, JC Marioni
Nature biotechnology 36 (5), 421-427, 2018
18422018
Diffusion pseudotime robustly reconstructs lineage branching
FBFJT Laleh Haghverdi, Maren Büttner, F Alexander Wolf
Nature Methods 13, 845–848, 2016
11972016
Diffusion maps for high-dimensional single-cell analysis of differentiation data
L Haghverdi, F Buettner, FJ Theis
Bioinformatics 31 (18), 2989-2998, 2015
6472015
destiny: diffusion maps for large-scale single-cell data in R
P Angerer, L Haghverdi, M Büttner, FJ Theis, C Marr, F Buettner
Bioinformatics 32 (8), 1241-1243, 2016
5742016
Decoding the regulatory network of early blood development from single-cell gene expression measurements
V Moignard, S Woodhouse, L Haghverdi, AJ Lilly, Y Tanaka, ...
Nature biotechnology 33 (3), 269-276, 2015
4282015
Reconstructing gene regulatory dynamics from high-dimensional single-cell snapshot data
A Ocone, L Haghverdi, NS Mueller, FJ Theis
Bioinformatics 31 (12), i89-i96, 2015
1662015
Single-cell transcriptomics reveals common epithelial response patterns in human acute kidney injury
C Hinze, C Kocks, J Leiz, N Karaiskos, A Boltengagen, S Cao, ...
Genome Medicine 14 (1), 103, 2022
372022
Sparse stabilization of dynamical systems driven by attraction and avoidance forces
M Bongini, M Fornasier
Networks and Heterogeneous Media 9 (1), 1-31, 2014
342014
Towards reliable quantification of cell state velocities
V Marot-Lassauzaie, BJ Bouman, FD Donaghy, Y Demerdash, ...
PLoS Computational Biology 18 (9), e1010031, 2022
182022
Correcting batch effects in single-cell RNA sequencing data by matching mutual nearest neighbours
L Haghverdi, ATL Lun, MD Morgan, JC Marioni
biorxiv, 165118, 2017
152017
Single-cell multi-omics and lineage tracing to dissect cell fate decision-making
L Haghverdi, LS Ludwig
Stem Cell Reports 18 (1), 13-25, 2023
142023
Bone marrow immune signatures in multiple myeloma are linked to tumor heterogeneity and treatment outcome
S Steiger, R Lutz, N Prokoph, S Palit, SM Tirier, P Reichert, A Baumann, ...
Blood 140 (Supplement 1), 2083-2085, 2022
42022
Sparse control of force field dynamics
M Bongini, M Fornasier, F Frcöhlich, L Haghverdi
2014 7th International Conference on NETwork Games, COntrol and OPtimization …, 2014
42014
Adjustments to the reference dataset design improve cell type label transfer
C Mölbert, L Haghverdi
Frontiers in Bioinformatics 3, 1150099, 2023
22023
Transcriptomic responses of the human kidney to acute injury at single cell resolution
C Hinze, C Kocks, J Leiz, N Karaiskos, A Boltengagen, CM Skopnik, ...
bioRxiv, 2021.12. 15.472619, 2021
22021
Package ‘scran’
A Lun, K Bach, JK Kim, A Scialdone, L Haghverdi
22017
Decoding the transcriptional program for blood development from whole tissue single-cell gene expression measurements
V Moignard, S Woodhouse, L Haghverdi, J Lilly, Y Tanaka, A Wilkinson, ...
Experimental Hematology 42 (8), S52, 2014
22014
Single-cell time series analysis reveals the dynamics of HSPC response to inflammation
BJ Bouman, Y Demerdash, S Sood, F Grünschläger, F Pilz, AR Itani, ...
Life Science Alliance 7 (3), 2024
12024
Single-cell time series analysis reveals the dynamics ofin vivoHSPC responses to inflammation
BJ Bouman, Y Demerdash, S Sood, F Grünschläger, F Pilz, AR Itani, ...
12023
Single-cell time series analysis reveals the dynamics of in vivo HSPC responses to inflammation
BJ Bouman, Y Demerdash, S Sood, F Grünschläger, F Pilz, AR Itani, ...
bioRxiv, 2023.03. 09.531881, 2023
12023
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