A global genetic interaction network maps a wiring diagram of cellular function M Costanzo, B VanderSluis, EN Koch, A Baryshnikova, C Pons, G Tan, ... Science 353 (6306), aaf1420, 2016 | 1308 | 2016 |
A reference map of the human binary protein interactome K Luck, DK Kim, L Lambourne, K Spirohn, BE Begg, W Bian, R Brignall, ... Nature 580 (7803), 402-408, 2020 | 1048 | 2020 |
pyDockWEB: a web server for rigid-body protein–protein docking using electrostatics and desolvation scoring B Jiménez-García, C Pons, J Fernández-Recio Bioinformatics 29 (13), 1698-1699, 2013 | 290 | 2013 |
Systematic analysis of complex genetic interactions E Kuzmin, B VanderSluis, W Wang, G Tan, R Deshpande, Y Chen, M Usaj, ... Science 360 (6386), eaao1729, 2018 | 289 | 2018 |
A framework for exhaustively mapping functional missense variants J Weile, S Sun, AG Cote, J Knapp, M Verby, JC Mellor, Y Wu, C Pons, ... Molecular systems biology 13 (12), 957, 2017 | 191 | 2017 |
Exploring genetic suppression interactions on a global scale J Van Leeuwen, C Pons, JC Mellor, TN Yamaguchi, H Friesen, ... Science 354 (6312), aag0839, 2016 | 189 | 2016 |
FRODOCK: a new approach for fast rotational protein–protein docking JI Garzon, JR Lopéz-Blanco, C Pons, J Kovacs, R Abagyan, ... Bioinformatics 25 (19), 2544-2551, 2009 | 180 | 2009 |
Community-wide assessment of protein-interface modeling suggests improvements to design methodology SJ Fleishman, TA Whitehead, EM Strauch, JE Corn, S Qin, HX Zhou, ... Journal of Molecular Biology, 2011 | 158 | 2011 |
Towards the prediction of protein interaction partners using physical docking MN Wass, G Fuentes, C Pons, F Pazos, A Valencia Molecular systems biology 7 (1), 469, 2011 | 150 | 2011 |
Present and future challenges and limitations in protein–protein docking C Pons, S Grosdidier, A Solernou, L Pérez‐Cano, J Fernández‐Recio Proteins: Structure, Function, and Bioinformatics 78 (1), 95-108, 2010 | 110 | 2010 |
Extensive rewiring and complex evolutionary dynamics in a C. elegans multiparameter transcription factor network JS Reece-Hoyes, C Pons, A Diallo, A Mori, S Shrestha, S Kadreppa, ... Molecular cell 51 (1), 116-127, 2013 | 100 | 2013 |
Pushing structural information into the yeast interactome by high-throughput protein docking experiments R Mosca, C Pons, J Fernández-Recio, P Aloy PLoS computational biology 5 (8), e1000490, 2009 | 92 | 2009 |
Scoring by Intermolecular Pairwise Propensities of Exposed Residues (SIPPER): A New Efficient Potential for Protein− Protein Docking C Pons, D Talavera, X de la Cruz, M Orozco, J Fernandez-Recio Journal of chemical information and modeling 51 (2), 370-377, 2011 | 80 | 2011 |
Structural prediction of protein-RNA interaction by computational docking with propensity-based statistical potentials L Pérez-Cano, A Solernou, C Pons, J Fernández-Recio Biocomputing 2010, 293-301, 2010 | 79 | 2010 |
Structural characterization of protein-protein complexes by integrating computational docking with small-angle scattering data C Pons, M D'Abramo, DI Svergun, M Orozco, P Bernadó, ... Journal of molecular biology 403 (2), 217-230, 2010 | 77 | 2010 |
pyDockSAXS: protein–protein complex structure by SAXS and computational docking B Jiménez-García, C Pons, DI Svergun, P Bernadó, J Fernández-Recio Nucleic acids research 43 (W1), W356-W361, 2015 | 76 | 2015 |
Transcription factor activity mapping of a tissue-specific in vivo gene regulatory network LT MacNeil, C Pons, HE Arda, GE Giese, CL Myers, AJM Walhout Cell Systems 1 (2), 152-162, 2015 | 71 | 2015 |
A gene‐centered C. elegans protein–DNA interaction network provides a framework for functional predictions JI Fuxman Bass, C Pons, L Kozlowski, JS Reece‐Hoyes, S Shrestha, ... Molecular systems biology 12 (10), 884, 2016 | 70 | 2016 |
Features of the chaperone cellular network revealed through systematic interaction mapping K Rizzolo, J Huen, A Kumar, S Phanse, J Vlasblom, Y Kakihara, ... Cell reports 20 (11), 2735-2748, 2017 | 66 | 2017 |
Environmental robustness of the global yeast genetic interaction network M Costanzo, J Hou, V Messier, J Nelson, M Rahman, B VanderSluis, ... Science 372 (6542), eabf8424, 2021 | 63 | 2021 |