| Invasion from the cold past: extensive introgression of mountain hare (Lepus timidus) mitochondrial DNA into three other hare species in northern Iberia J MELO‐FERREIRA, P Boursot, F Suchentrunk, N Ferrand, PC Alves Molecular Ecology 14 (8), 2459-2464, 2005 | 239 | 2005 |
| Genetic basis for red coloration in birds RJ Lopes, JD Johnson, MB Toomey, MS Ferreira, PM Araujo, ... Current Biology 26 (11), 1427-1434, 2016 | 220 | 2016 |
| Adaptive introgression underlies polymorphic seasonal camouflage in snowshoe hares MR Jones, LS Mills, PC Alves, CM Callahan, JM Alves, DJR Lafferty, ... Science 360 (6395), 1355-1358, 2018 | 215 | 2018 |
| Reference-free population genomics from next-generation transcriptome data and the vertebrate–invertebrate gap P Gayral, J Melo-Ferreira, S Glémin, N Bierne, M Carneiro, B Nabholz, ... PLoS genetics 9 (4), e1003457, 2013 | 174 | 2013 |
| Reference‐free transcriptome assembly in non‐model animals from next‐generation sequencing data V Cahais, P Gayral, G Tsagkogeorga, J MELO‐FERREIRA, ... Molecular ecology resources 12 (5), 834-845, 2012 | 169 | 2012 |
| The ubiquitous mountain hare mitochondria: multiple introgressive hybridization in hares, genus Lepus PC Alves, J Melo-Ferreira, H Freitas, P Boursot Philosophical Transactions of the Royal Society B: Biological Sciences 363 …, 2008 | 141 | 2008 |
| The rise and fall of the mountain hare (Lepus timidus) during Pleistocene glaciations: expansion and retreat with hybridization in the Iberian Peninsula J MELO‐FERREIRA, P Boursot, E Randi, A Kryukov, F Suchentrunk, ... Molecular Ecology 16 (3), 605-618, 2007 | 132 | 2007 |
| Recurrent introgression of mitochondrial DNA among hares (Lepus spp.) revealed by species-tree inference and coalescent simulations J Melo-Ferreira, P Boursot, M Carneiro, PJ Esteves, L Farelo, PC Alves Systematic biology 61 (3), 367-381, 2012 | 121 | 2012 |
| Function and underlying mechanisms of seasonal colour moulting in mammals and birds: what keeps them changing in a warming world? M Zimova, K Hackländer, JM Good, J Melo‐Ferreira, PC Alves, LS Mills Biological Reviews 93 (3), 1478-1498, 2018 | 118 | 2018 |
| The genomic architecture of population divergence between subspecies of the European rabbit M Carneiro, FW Albert, S Afonso, RJ Pereira, H Burbano, R Campos, ... PLoS genetics 10 (8), e1003519, 2014 | 98 | 2014 |
| Winter color polymorphisms identify global hot spots for evolutionary rescue from climate change LS Mills, EV Bragina, AV Kumar, M Zimova, DJR Lafferty, J Feltner, ... Science 359 (6379), 1033-1036, 2018 | 97 | 2018 |
| The elusive nature of adaptive mitochondrial DNA evolution of an arctic lineage prone to frequent introgression J Melo-Ferreira, J Vilela, MM Fonseca, RR da Fonseca, P Boursot, ... Genome biology and evolution 6 (4), 886-896, 2014 | 88 | 2014 |
| Evidence for widespread positive and purifying selection across the European rabbit (Oryctolagus cuniculus) genome M Carneiro, FW Albert, J Melo-Ferreira, N Galtier, P Gayral, ... Molecular biology and evolution 29 (7), 1837-1849, 2012 | 88 | 2012 |
| The genomic legacy from the extinct Lepus timidus to the three hare species of Iberia: contrast between mtDNA, sex chromosomes and autosomes J MELO‐FERREIRA, PC Alves, H Freitas, N Ferrand, P Boursot Molecular Ecology 18 (12), 2643-2658, 2009 | 85 | 2009 |
| Advances in Ecological Speciation: an integrative approach R Faria, S Renaut, J Galindo, C Pinho, J Melo‐Ferreira, M Melo, F Jones, ... Molecular ecology 23 (3), 513-521, 2014 | 77 | 2014 |
| Cryptic speciation in the field vole: a multilocus approach confirms three highly divergent lineages in Eurasia J Paupério, JS Herman, J Melo‐Ferreira, M Jaarola, PC Alves, JB Searle Molecular ecology 21 (24), 6015-6032, 2012 | 72 | 2012 |
| The genomic impact of historical hybridization with massive mitochondrial DNA introgression FA Seixas, P Boursot, J Melo-Ferreira Genome biology 19 (1), 91, 2018 | 68 | 2018 |
| Introgression of mitochondrial DNA among Myodes voles: consequences for energetics? Z Boratyński, PC Alves, S Berto, E Koskela, T Mappes, J Melo-Ferreira BMC evolutionary biology 11 (1), 355, 2011 | 62 | 2011 |
| Hares on thin ice: introgression of mitochondrial DNA in hares and its implications for recent phylogenetic analyses PC Alves, DJ Harris, J Melo-Ferreira, M Branco, F Suchentrunk, P Boursot, ... Molecular phylogenetics and evolution 2 (40), 640-641, 2006 | 61 | 2006 |
| Parapatric species and the implications for climate change studies: a case study on hares in Europe P Acevedo, A Jiménez‐Valverde, J Melo‐Ferreira, R Real, PC Alves Global Change Biology 18 (5), 1509-1519, 2012 | 60 | 2012 |
