Guillem Portella
Guillem Portella
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Parmbsc1: a refined force field for DNA simulations
I Ivani, PD Dans, A Noy, A Pérez, I Faustino, A Hospital, J Walther, ...
Nature methods 13 (1), 55-58, 2016
Local Aromaticity of [n]Acenes, [n]Phenacenes, and [n]Helicenes (n = 1−9)
G Portella, J Poater, JM Bofill, P Alemany, M Sola
The Journal of organic chemistry 70 (7), 2509-2521, 2005
Assessment of Clar's aromatic π‐sextet rule by means of PDI, NICS and HOMA indicators of local aromaticity
G Portella, J Poater, M Sola
Journal of physical organic chemistry 18 (8), 785-791, 2005
Molecular basis of substrate-induced permeation by an amino acid antiporter
L Kowalczyk, M Ratera, A Paladino, P Bartoccioni, E Errasti-Murugarren, ...
Proceedings of the National Academy of Sciences 108 (10), 3935-3940, 2011
Chromatin unfolding by epigenetic modifications explained by dramatic impairment of internucleosome interactions: a multiscale computational study
R Collepardo-Guevara, G Portella, M Vendruscolo, D Frenkel, T Schlick, ...
Journal of the American Chemical Society 137 (32), 10205-10215, 2015
How accurate are accurate force-fields for B-DNA?
PD Dans, I Ivani, A Hospital, G Portella, C González, M Orozco
Nucleic Acids Research 45 (7), 4217-4230, 2017
RNA G-quadruplexes at upstream open reading frames cause DHX36-and DHX9-dependent translation of human mRNAs
P Murat, G Marsico, B Herdy, A Ghanbarian, G Portella, ...
Genome biology 19, 1-24, 2018
5-Formylcytosine organizes nucleosomes and forms Schiff base interactions with histones in mouse embryonic stem cells
EA Raiber, G Portella, S Martínez Cuesta, R Hardisty, P Murat, Z Li, ...
Nature chemistry 10 (12), 1258-1266, 2018
Differential stability of 2′ F-ANA• RNA and ANA• RNA hybrid duplexes: roles of structure, pseudohydrogen bonding, hydration, ion uptake and flexibility
JK Watts, N Martín-Pintado, I Gomez-Pinto, J Schwartzentruber, G Portella, ...
Nucleic acids research 38 (7), 2498-2511, 2010
Dramatic effect of furanose C2′ substitution on structure and stability: directing the folding of the human telomeric quadruplex with a single fluorine atom
N Martín-Pintado, M Yahyaee-Anzahaee, GF Deleavey, G Portella, ...
Journal of the American Chemical Society 135 (14), 5344-5347, 2013
Time averaging of NMR chemical shifts in the MLF peptide in the solid state
ID Gortari, G Portella, X Salvatella, VS Bajaj, PCA van der Wel, JR Yates, ...
Journal of the American Chemical Society 132 (17), 5993-6000, 2010
Structure of triplex DNA in the gas phase
A Arcella, G Portella, ML Ruiz, R Eritja, M Vilaseca, V Gabelica, M Orozco
Journal of the American Chemical Society 134 (15), 6596-6606, 2012
Backbone FC H⋅⋅⋅ O Hydrogen Bonds in 2′ F-Substituted Nucleic Acids.
N Martin‐Pintado, GF Deleavey, G Portella, R Campos‐Olivas, M Orozco, ...
Angewandte Chemie International Edition 52 (46), 2013
Understanding the connection between epigenetic DNA methylation and nucleosome positioning from computer simulations
G Portella, F Battistini, M Orozco
PLoS computational biology 9 (11), e1003354, 2013
G-quadruplex DNA structures in human stem cells and differentiation
KG Zyner, A Simeone, SM Flynn, C Doyle, G Marsico, S Adhikari, ...
Nature Communications 13 (1), 142, 2022
Mobility of a one-dimensional confined file of water molecules as a function of file length
SM Saparov, JR Pfeifer, L Al-Momani, G Portella, BL de Groot, U Koert, ...
Physical review letters 96 (14), 148101, 2006
MD and NMR analyses of choline and TMA binding to duplex DNA: on the origins of aberrant sequence-dependent stability by alkyl cations in aqueous and water-free solvents
G Portella, MW Germann, NV Hud, M Orozco
Journal of the American Chemical Society 136 (8), 3075-3086, 2014
The RNF168 paralog RNF169 defines a new class of ubiquitylated histone reader involved in the response to DNA damage
J Kitevski-LeBlanc, A Fradet-Turcotte, P Kukic, MD Wilson, G Portella, ...
Elife 6, e23872, 2017
Parmbsc: a refined force field for dna simulations
I Ivani, PD Dans, A Noy, A Pérez, I Faustino, A Hospital, J Walther, ...
Nature 201, 5, 2016
Multiple routes to characterize the folding of a small DNA hairpin
G Portella, M Orozco
Angewandte Chemie 122 (42), 7839-7842, 2010
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