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Quaid Morris
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The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function
D Warde-Farley, SL Donaldson, O Comes, K Zuberi, R Badrawi, P Chao, ...
Nucleic acids research 38 (suppl_2), W214-W220, 2010
42552010
The genetic landscape of a cell
M Costanzo, A Baryshnikova, J Bellay, Y Kim, ED Spear, CS Sevier, ...
science 327 (5964), 425-431, 2010
25262010
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
1863*2020
A compendium of RNA-binding motifs for decoding gene regulation
D Ray, H Kazan, KB Cook, MT Weirauch, HS Najafabadi, X Li, ...
Nature 499 (7457), 172-177, 2013
15502013
The human splicing code reveals new insights into the genetic determinants of disease
HY Xiong, B Alipanahi, LJ Lee, H Bretschneider, D Merico, RKC Yuen, ...
Science 347 (6218), 1254806, 2015
14472015
Diversity and complexity in DNA recognition by transcription factors
G Badis, MF Berger, AA Philippakis, S Talukder, AR Gehrke, SA Jaeger, ...
Science 324 (5935), 1720-1723, 2009
11632009
GeneMANIA: a real-time multiple association network integration algorithm for predicting gene function
S Mostafavi, D Ray, D Warde-Farley, C Grouios, Q Morris
Genome biology 9, 1-15, 2008
10662008
The evolutionary history of 2,658 cancers
M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ...
Nature 578 (7793), 122-128, 2020
9552020
GeneMANIA update 2018
M Franz, H Rodriguez, C Lopes, K Zuberi, J Montojo, GD Bader, Q Morris
Nucleic acids research 46 (W1), W60-W64, 2018
9472018
Dynamic modularity in protein interaction networks predicts breast cancer outcome
IW Taylor, R Linding, D Warde-Farley, Y Liu, C Pesquita, D Faria, S Bull, ...
Nature biotechnology 27 (2), 199-204, 2009
8652009
Cytoscape Web: an interactive web-based network browser
CT Lopes, M Franz, F Kazi, SL Donaldson, Q Morris, GD Bader
Bioinformatics 26 (18), 2347-2348, 2010
8352010
Exploration of essential gene functions via titratable promoter alleles
S Mnaimneh, AP Davierwala, J Haynes, J Moffat, WT Peng, W Zhang, ...
Cell 118 (1), 31-44, 2004
7222004
Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences
MF Berger, G Badis, AR Gehrke, S Talukder, AA Philippakis, ...
Cell 133 (7), 1266-1276, 2008
7192008
High-density proximity mapping reveals the subcellular organization of mRNA-associated granules and bodies
JY Youn, WH Dunham, SJ Hong, JDR Knight, M Bashkurov, GI Chen, ...
Molecular cell 69 (3), 517-532. e11, 2018
6912018
GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop
J Montojo, K Zuberi, H Rodriguez, F Kazi, G Wright, SL Donaldson, ...
Bioinformatics 26 (22), 2927-2928, 2010
6652010
RBPDB: a database of RNA-binding specificities
KB Cook, H Kazan, K Zuberi, Q Morris, TR Hughes
Nucleic acids research 39 (suppl_1), D301-D308, 2010
6102010
Global survey of organ and organelle protein expression in mouse: combined proteomic and transcriptomic profiling
T Kislinger, B Cox, A Kannan, C Chung, P Hu, A Ignatchenko, MS Scott, ...
Cell 125 (1), 173-186, 2006
5592006
Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins
D Ray, H Kazan, ET Chan, LP Castillo, S Chaudhry, S Talukder, ...
Nature biotechnology 27 (7), 667-670, 2009
5432009
Probing microRNAs with microarrays: tissue specificity and functional inference
T Babak, WEN Zhang, Q Morris, BJ Blencowe, TR Hughes
Rna 10 (11), 1813-1819, 2004
5042004
Using expression profiling data to identify human microRNA targets
JC Huang, T Babak, TW Corson, G Chua, S Khan, BL Gallie, TR Hughes, ...
Nature methods 4 (12), 1045-1049, 2007
4762007
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