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Olin Silander
Olin Silander
Senior Research Fellow, Liggins Institute, University of Auckland
Verified email at auckland.ac.nz - Homepage
Title
Cited by
Cited by
Year
Automated reconstruction of whole-genome phylogenies from short-sequence reads
F Bertels, OK Silander, M Pachkov, PB Rainey, E Van Nimwegen
Molecular biology and evolution 31 (5), 1077-1088, 2014
4452014
Rapid and inexpensive whole-genome sequencing of SARS-CoV-2 using 1200 bp tiled amplicons and Oxford Nanopore Rapid Barcoding
NE Freed, M Vlková, MB Faisal, OK Silander
Biology Methods and Protocols 5 (1), bpaa014, 2020
2402020
Understanding the evolutionary fate of finite populations: the dynamics of mutational effects
OK Silander, O Tenaillon, L Chao
PLoS biology 5 (4), e94, 2007
2112007
A Genome-Wide Analysis of Promoter-Mediated Phenotypic Noise in Escherichia coli
OK Silander, N Nikolic, A Zaslaver, A Bren, U Kikoin, Ilya, Alon, ...
PLoS Genetics, 2012
1942012
Tracking the international spread of SARS-CoV-2 lineages B. 1.1. 7 and B. 1.351/501Y-V2 with grinch
Á O'Toole, V Hill, OG Pybus, A Watts, II Bogoch, K Khan, JP Messina, ...
Wellcome Open Research 6, 2021
1862021
Epistasis between deleterious mutations and the evolution of recombination
RD Kouyos, OK Silander, S Bonhoeffer
Trends in ecology & evolution 22 (6), 308-315, 2007
1692007
Alterations of the X-linked lymphoproliferative disease geneSH2D1A in common variable immunodeficiency syndrome
M Morra, O Silander, S Calpe, M Choi, H Oettgen, L Myers, A Etzioni, ...
Blood, The Journal of the American Society of Hematology 98 (5), 1321-1325, 2001
1362001
Monitoring single-cell gene regulation under dynamically controllable conditions with integrated microfluidics and software
M Kaiser, F Jug, T Julou, S Deshpande, T Pfohl, OK Silander, G Myers, ...
Nature communications 9 (1), 212, 2018
1232018
Expression noise facilitates the evolution of gene regulation
L Wolf, OK Silander, E van Nimwegen
eLife 4, e05856, 2015
1162015
Characterization of SH2D1A missense mutations identified in X-linked lymphoproliferative disease patients
M Morra, M Simarro-Grande, M Martin, ASI Chen, A Lanyi, O Silander, ...
Journal of Biological Chemistry 276 (39), 36809-36816, 2001
1072001
Testing the advantages and disadvantages of short-and long-read eukaryotic metagenomics using simulated reads
WS Pearman, NE Freed, OK Silander
BMC Bioinformatics 21, 1-15, 2020
98*2020
A simple screen to identify promoters conferring high levels of phenotypic noise
NE Freed, OK Silander, B Stecher, A Böhm, WD Hardt, M Ackermann
PLoS genetics 4 (12), e1000307, 2008
962008
Patterns of evolutionary conservation of essential genes correlate with their compensability
T Bergmiller, M Ackermann, OK Silander
PLoS genetics 8 (6), e1002803, 2012
932012
Quantitative analysis of persister fractions suggests different mechanisms of formation among environmental isolates of E. coli
N Hofsteenge, E van Nimwegen, OK Silander
BMC microbiology 13, 1-11, 2013
912013
Quantifying organismal complexity using a population genetic approach
O Tenaillon, OK Silander, JP Uzan, L Chao
PloS one 2 (2), e217, 2007
842007
The predictability of molecular evolution during functional innovation
D Blank, L Wolf, M Ackermann, OK Silander
Proceedings of the National Academy of Sciences 111 (8), 3044-3049, 2014
832014
Widespread genetic exchange among terrestrial bacteriophages
OK Silander, DM Weinreich, KM Wright, KJ O'Keefe, CU Rang, PE Turner, ...
Proceedings of the National Academy of Sciences 102 (52), 19009-19014, 2005
722005
Opposite effects of KCTD subunit domains on GABAB receptor-mediated desensitization
R Seddik, SP Jungblut, OK Silander, M Rajalu, T Fritzius, V Besseyrias, ...
Journal of Biological Chemistry 287 (47), 39869-39877, 2012
572012
Use of genomics to track coronavirus disease outbreaks, New Zealand
JL Geoghegan, J Douglas, X Ren, M Storey, J Hadfield, OK Silander, ...
Emerging Infectious Diseases 27 (5), 1317, 2021
412021
Disruption of Esrom and Ryk identifies the roof plate boundary as an intermediate target for commissure formation
M Hendricks, AS Mathuru, H Wang, O Silander, MZL Kee, S Jesuthasan
Molecular and Cellular Neuroscience 37 (2), 271-283, 2008
262008
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Articles 1–20