Kushal K Dey
Kushal K Dey
Assistant Professor/Member, Josie Robertson Investigator, Memorial Sloan Kettering Cancer Center
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Zitiert von
Zitiert von
COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets
TM Delorey, CGK Ziegler, G Heimberg, R Normand, Y Yang, ...
Nature 595 (7865), 107-113, 2021
Genome-wide enhancer maps link risk variants to disease genes
J Nasser, DT Bergman, CP Fulco, P Guckelberger, BR Doughty, ...
Nature 593 (7858), 238-243, 2021
Photochemical Modulation of Biosafe Manganese Nanoparticles on Vigna radiata: A Detailed Molecular, Biochemical, and Biophysical Study
S Pradhan, P Patra, S Das, S Chandra, S Mitra, KK Dey, S Akbar, P Palit, ...
Environmental Science & Technology 47 (22), 13122-13131, 2013
Visualizing the structure of RNA-seq expression data using grade of membership models
KK Dey, CJ Hsiao, M Stephens
PLoS genetics 13 (3), e1006599, 2017
Improving the trans-ancestry portability of polygenic risk scores by prioritizing variants in predicted cell-type-specific regulatory elements
T Amariuta, K Ishigaki, H Sugishita, T Ohta, M Koido, KK Dey, K Matsuda, ...
Nature genetics 52 (12), 1346-1354, 2020
Genetic history from the Middle Neolithic to present on the Mediterranean island of Sardinia
JH Marcus, C Posth, H Ringbauer, L Lai, R Skeates, C Sidore, J Beckett, ...
Nature communications 11 (1), 939, 2020
Strengths and limitations of microarray-based phenotype prediction: lessons learned from the IMPROVER Diagnostic Signature Challenge
AL Tarca, M Lauria, M Unger, E Bilal, S Boue, K Kumar Dey, J Hoeng, ...
Bioinformatics 29 (22), 2892-2899, 2013
Manganese nanoparticles: impact on non-nodulated plant as a potent enhancer in nitrogen metabolism and toxicity study both in vivo and in vitro
S Pradhan, P Patra, S Mitra, KK Dey, S Jain, S Sarkar, S Roy, P Palit, ...
Journal of agricultural and food chemistry 62 (35), 8777-8785, 2014
Identifying disease-critical cell types and cellular processes by integrating single-cell RNA-sequencing and human genetics
KA Jagadeesh, KK Dey, DT Montoro, R Mohan, S Gazal, JM Engreitz, ...
Nature genetics 54 (10), 1479-1492, 2022
Combining SNP-to-gene linking strategies to identify disease genes and assess disease omnigenicity
S Gazal, O Weissbrod, F Hormozdiari, KK Dey, J Nasser, KA Jagadeesh, ...
Nature genetics 54 (6), 827-836, 2022
Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis
CJ Hsiao, PY Tung, JD Blischak, JE Burnett, KA Barr, KK Dey, ...
Genome research 30 (4), 611-621, 2020
Copper Nanoparticle (CuNP) Nanochain Arrays with a Reduced Toxicity Response: A Biophysical and Biochemical Outlook on Vigna radiata
S Pradhan, P Patra, S Mitra, KK Dey, S Basu, S Chandra, P Palit, ...
Journal of agricultural and food chemistry 63 (10), 2606-2617, 2015
Polygenic architecture of rare coding variation across 394,783 exomes
DJ Weiner, A Nadig, KA Jagadeesh, KK Dey, BM Neale, EB Robinson, ...
Nature 614 (7948), 492-499, 2023
Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data
MJ Zhang, K Hou, KK Dey, S Sakaue, KA Jagadeesh, K Weinand, ...
Nature genetics 54 (10), 1572-1580, 2022
A new sequence logo plot to highlight enrichment and depletion
KK Dey, D Xie, M Stephens
BMC bioinformatics 19, 1-9, 2018
Microwave synthesis of ZnO@ mSiO2 for detailed antifungal mode of action study: understanding the insights into oxidative stress
S Mitra, P Patra, S Pradhan, N Debnath, KK Dey, S Sarkar, ...
Journal of colloid and interface science 444, 97-108, 2015
Regional influences on community structure across the tropical-temperate divide
AE White, KK Dey, D Mohan, M Stephens, TD Price
Nature Communications 10 (1), 2646, 2019
SAIGE-GENE+ improves the efficiency and accuracy of set-based rare variant association tests
W Zhou, W Bi, Z Zhao, KK Dey, KA Jagadeesh, KJ Karczewski, MJ Daly, ...
Nature genetics 54 (10), 1466-1469, 2022
A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2
TM Delorey, CGK Ziegler, G Heimberg, R Normand, Y Yang, ...
Biorxiv, 2021
Evaluating the informativeness of deep learning annotations for human complex diseases
KK Dey, B Van de Geijn, SS Kim, F Hormozdiari, DR Kelley, AL Price
Nature communications 11 (1), 4703, 2020
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