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Anaïs Baudot
Anaïs Baudot
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Zitiert von
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EnrichNet: network-based gene set enrichment analysis
E Glaab, A Baudot, N Krasnogor, R Schneider, A Valencia
Bioinformatics 28 (18), i451-i457, 2012
3612012
Assessment of network module identification across complex diseases
S Choobdar, ME Ahsen, J Crawford, M Tomasoni, T Fang, D Lamparter, ...
Nature methods 16 (9), 843-852, 2019
273*2019
Random Walk with Restart on Multiplex and Heterogeneous Biological Networks
A Valdeolivas, L Tichit, C Navarro, S Perrin, G Odelin, N Levy, P Cau, ...
Bioinformatics, 2018
2482018
Molecular Evidence for the Inverse Comorbidity between Central Nervous System Disorders and Cancers Detected by Transcriptomic Meta-analyses
K Ibáñez, C Boullosa, R Tabarés-Seisdedos, A Baudot, A Valencia
PLoS genetics 10 (2), e1004173, 2014
2032014
Benchmarking joint multi-omics dimensionality reduction approaches for the study of cancer
L Cantini, P Zakeri, C Hernandez, A Naldi, D Thieffry, E Remy, A Baudot
Nature Communications 12 (1), 1-12, 2021
1552021
No paradox, no progress: inverse cancer comorbidity in people with other complex diseases
R Tabarés-Seisdedos, N Dumont, A Baudot, JM Valderas, J Climent, ...
The lancet oncology 12 (6), 604-608, 2011
1532011
Discovery of drug synergies in gastric cancer cells predicted by logical modeling
Å Flobak, A Baudot, E Remy, L Thommesen, D Thieffry, M Kuiper, ...
PLoS computational biology 11 (8), e1004426, 2015
1292015
A molecular hypothesis to explain direct and inverse co-morbidities between Alzheimer's Disease, Glioblastoma and Lung cancer.
J Sánchez-Valle, H Tejero, K Ibáñez, JL Portero, M Krallinger, ...
Scientific reports 7 (1), 4474, 2017
1012017
TopoGSA: network topological gene set analysis
E Glaab, A Baudot, N Krasnogor, A Valencia
Bioinformatics 26 (9), 1271-1272, 2010
1012010
The functional landscape of Hsp27 reveals new cellular processes such as DNA repair and alternative splicing and proposes novel anticancer targets
M Katsogiannou, C Andrieu, V Baylot, A Baudot, NJ Dusetti, O Gayet, ...
Molecular & Cellular Proteomics 13 (12), 3585-3601, 2014
742014
Extending pathways and processes using molecular interaction networks to analyse cancer genome data
E Glaab, A Baudot, N Krasnogor, A Valencia
BMC bioinformatics 11 (1), 1-11, 2010
722010
Interactome mapping of the phosphatidylinositol 3-kinase-mammalian target of rapamycin pathway identifies deformed epidermal autoregulatory factor-1 as a new glycogen synthase …
F Pilot-Storck, E Chopin, JF Rual, A Baudot, P Dobrokhotov, ...
Molecular & Cellular Proteomics 9 (7), 1578-1593, 2010
722010
Identifying communities from multiplex biological networks
G Didier, C Brun, A Baudot
PeerJ 3, e1525, 2015
712015
The Gastrin and Cholecystokinin Receptors mediated signaling network: A scaffold for data analysis and new hypotheses on regulatory mechanisms
S Tripathi, Å Flobak, K Chawla, A Baudot, JN Doni, N Skjøndal-Bar, ...
602015
A scale of functional divergence for yeast duplicated genes revealed from analysis of the protein-protein interaction network
A Baudot, B Jacq, C Brun
Genome biology 5 (10), 1-13, 2004
502004
Clust&See: A Cytoscape plugin for the identification, visualization and manipulation of network clusters
L Spinelli, P Gambette, CE Chapple, B Robisson, A Baudot, H Garreta, ...
BioSystems 113 (2), 91-95, 2013
482013
Mutated genes, pathways and processes in tumours
A Baudot, V de la Torre, A Valencia
EMBO reports 11 (10), 805-810, 2010
452010
Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer
J Forés-Martos, F Catalá-López, J Sánchez-Valle, K Ibáñez, H Tejero, ...
Molecular autism 10 (1), 1-16, 2019
442019
From cancer genomes to cancer models: bridging the gaps
A Baudot, FX Real, JMG Izarzugaza, A Valencia
EMBO reports 10 (4), 359-366, 2009
422009
MultiVERSE: a multiplex and multiplex-heterogeneous network embedding approach
L Pio-Lopez, A Valdeolivas, L Tichit, É Remy, A Baudot
Scientific Reports 11 (1), 1-20, 2021
382021
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