Symplectic analytically integrable decomposition algorithms: classification, derivation, and application to molecular dynamics, quantum and celestial mechanics simulations IP Omelyan, IM Mryglod, R Folk Computer Physics Communications 151 (3), 272-314, 2003 | 368 | 2003 |
AMBER 2018. University of California, San Francisco (2018) DA Case, JT Berryman, RM Betz, DS Cerutti, TE Cheatham III, TA Darden, ... There is no corresponding record for this reference, 2015 | 262 | 2015 |
Generalized collective modes for the Lennard-Jones fluid IM Mryglod, IP Omelyan, MV Tokarchuk Molecular Physics 84 (2), 235-259, 1995 | 163 | 1995 |
Optimized Verlet-like algorithms for molecular dynamics simulations IP Omelyan, IM Mryglod, R Folk Physical Review E 65 (5), 056706, 2002 | 155 | 2002 |
AMBER; University of California: San Francisco, CA, 2015 DA Case, JT Berryman, RM Betz, DS Cerutti, TEIII Cheatham, TA Darden, ... | 144* | 2016 |
Optimized Forest–Ruth-and Suzuki-like algorithms for integration of motion in many-body systems IP Omelyan, IM Mryglod, R Folk Computer Physics Communications 146 (2), 188-202, 2002 | 133 | 2002 |
Construction of high-order force-gradient algorithms for integration of motion in classical and quantum systems IP Omelyan, IM Mryglod, R Folk Physical Review E 66 (2), 026701, 2002 | 131 | 2002 |
AMBER 2018 DA Case, SR Brozell, DS Cerutti, TEIII Cheatham, VWD Cruzeiro, ... University of California, San Francisco, 2018 | 126* | 2018 |
AmberTools 16 DA Case, RM Betz, W Botello-Smith, DS Cerutti, TE Cheatham III, ... University of California, San Francisco, 2016 | 124 | 2016 |
On the numerical integration of motion for rigid polyatomics: The modified quaternion approach IP Omelyan Computers in Physics 12 (1), 97-103, 1998 | 114 | 1998 |
AMBER 2016 DA Case, RM Betz, DS Cerutti, TEIII Cheatham, TA Darden, RE Duke, ... University of California, San Francisco, 2016 | 107* | 2016 |
Algorithm for molecular dynamics simulations of spin liquids IP Omelyan, IM Mryglod, R Folk Physical review letters 86 (5), 898, 2001 | 100 | 2001 |
Algorithm for numerical integration of the rigid-body equations of motion IP Omelyan Physical Review E 58 (1), 1169, 1998 | 86 | 1998 |
Generalized mode approach. 1. Transverse time correlation functions and generalized shear viscosity of a Lennard-Jones fluid IM Mryglod, IP Omelyan Molecular physics 90 (1), 91-99, 1997 | 55* | 1997 |
Unification of the kinetic and hydrodynamic approaches in the theory of dense gases and liquids DN Zubarev, VG Morozov, IP Omelyan, MV Tokarchuk Theoretical and Mathematical Physics 96 (3), 997-1012, 1993 | 52 | 1993 |
AMBER 2018 TA Darden, RE Duke, D Ghoreishi, MK Gilson, H Gohlke, AW Goetz, ... University of California, San Francisco, 2018 | 51 | 2018 |
Kinetic equations for dense gases and liquids DN Zubarev, VG Morozov, IP Omelyan, MV Tokarchuk Teoreticheskaya i Matematicheskaya Fizika 87 (1), 113-129, 1991 | 50 | 1991 |
Compressibility of tert-Butyl Alcohol-Water Mixtures: The Rism Theory I Omelyan, A Kovalenko, F Hirata Journal of Theoretical and Computational Chemistry 2 (02), 193-203, 2003 | 49 | 2003 |
MTS-MD of biomolecules steered with 3D-RISM-KH mean solvation forces accelerated with generalized solvation force extrapolation I Omelyan, A Kovalenko Journal of Chemical Theory and Computation 11 (4), 1875-1895, 2015 | 44 | 2015 |
AMBER 18; 2018 D Case, I Ben-Shalom, S Brozell, D Cerutti, T Cheatham III, V Cruzeiro, ... University of California, San Francisco 47, 2018 | 41 | 2018 |