Dissemination of Cephalosporin Resistance Genes between Escherichia coli Strains from Farm Animals and Humans by Specific Plasmid Lineages M de Been, VF Lanza, M de Toro, J Scharringa, W Dohmen, Y Du, J Hu, ... PLoS genetics 10 (12), e1004776, 2014 | 381 | 2014 |
Plasmid Flux in Escherichia coli ST131 Sublineages, Analyzed by Plasmid Constellation Network (PLACNET), a New Method for Plasmid Reconstruction from … VF Lanza, M de Toro, MP Garcillán-Barcia, A Mora, J Blanco, TM Coque, ... PLoS genetics 10 (12), e1004766, 2014 | 178 | 2014 |
Prediction of the intestinal resistome by a three-dimensional structure-based method E Ruppé, A Ghozlane, J Tap, N Pons, AS Alvarez, N Maziers, T Cuesta, ... Nature microbiology 4 (1), 112-123, 2019 | 175 | 2019 |
Microcins in Enterobacteriaceae: Peptide Antimicrobials in the Eco-Active Intestinal Chemosphere F Baquero, VF Lanza, MR Baquero, R Del Campo, DA Bravo-Vázquez Frontiers in microbiology 10, 2261, 2019 | 153 | 2019 |
In-depth resistome analysis by targeted metagenomics VF Lanza, F Baquero, JL Martínez, R Ramos-Ruíz, B González-Zorn, ... Microbiome 6, 1-14, 2018 | 145 | 2018 |
Evolutionary pathways and trajectories in antibiotic resistance F Baquero, JL Martinez, V F. Lanza, J Rodríguez-Beltrán, JC Galán, ... Clinical Microbiology Reviews 34 (4), e00050-19, 2021 | 143 | 2021 |
PLACNETw: a web-based tool for plasmid reconstruction from bacterial genomes L Vielva, M de Toro, VF Lanza, F de la Cruz Bioinformatics 33 (23), 3796-3798, 2017 | 119 | 2017 |
The Plasmidome of Firmicutes: Impact on the Emergence and the Spread of Resistance to Antimicrobials VF Lanza, AP Tedim, JL Martínez, F Baquero, TM Coque Plasmids: Biology and impact in biotechnology and discovery, 379-419, 2015 | 111 | 2015 |
Apparent nosocomial adaptation of Enterococcus faecalis predates the modern hospital era AK Pöntinen, J Top, S Arredondo-Alonso, G Tonkin-Hill, AR Freitas, ... Nature communications 12 (1), 1523, 2021 | 109 | 2021 |
Four main virotypes among extended-spectrum-β-lactamase-producing isolates of Escherichia coli O25b: H4-B2-ST131: bacterial, epidemiological, and clinical characteristics J Blanco, A Mora, R Mamani, C López, M Blanco, G Dahbi, A Herrera, ... Journal of Clinical Microbiology 51 (10), 3358-3367, 2013 | 109 | 2013 |
Gene transmission in the one health microbiosphere and the channels of antimicrobial resistance F Baquero, TM Coque, JL Martínez, S Aracil-Gisbert, VF Lanza Frontiers in microbiology 10, 2892, 2019 | 107 | 2019 |
Ecogenetics of antibiotic resistance in Listeria monocytogenes F Baquero, V F. Lanza, M Duval, TM Coque Molecular microbiology 113 (3), 570-579, 2020 | 89 | 2020 |
PipX, the coactivator of NtcA, is a global regulator in cyanobacteria J Espinosa, F Rodríguez-Mateos, P Salinas, VF Lanza, R Dixon, ... Proceedings of the National Academy of Sciences 111 (23), E2423-E2430, 2014 | 87 | 2014 |
Public health evolutionary biology of antimicrobial resistance: priorities for intervention F Baquero, VF Lanza, R Cantón, TM Coque Evolutionary applications 8 (3), 223-239, 2015 | 79 | 2015 |
Fecal microbiota transplantation in HIV: A pilot placebo-controlled study S Serrano-Villar, A Talavera-Rodríguez, MJ Gosalbes, N Madrid, ... Nature Communications 12 (1), 1139, 2021 | 76 | 2021 |
Genomic and metagenomic technologies to explore the antibiotic resistance mobilome JL Martínez, TM Coque, VF Lanza, F de la Cruz, F Baquero Annals of the New York Academy of Sciences 1388 (1), 26-41, 2017 | 60 | 2017 |
Comparative genomics of global optrA-carrying Enterococcus faecalis uncovers a common chromosomal hotspot for optrA acquisition within a diversity of core … AR Freitas, AP Tedim, C Novais, VF Lanza, L Peixe Microbial genomics 6 (6), e000350, 2020 | 55 | 2020 |
The challenges of designing a benchmark strategy for bioinformatics pipelines in the identification of antimicrobial resistance determinants using next generation sequencing … A Angers-Loustau, M Petrillo, J Bengtsson-Palme, T Berendonk, B Blais, ... F1000Research 7, 2018 | 52 | 2018 |
AcCNET (Accessory Genome Constellation Network): comparative genomics software for accessory genome analysis using bipartite networks VF Lanza, F Baquero, F de la Cruz, TM Coque Bioinformatics 33 (2), 283-285, 2017 | 47 | 2017 |
Co-diversification of Enterococcus faecium Core Genomes and PBP5: Evidences of pbp5 Horizontal Transfer C Novais, AP Tedim, VF Lanza, AR Freitas, E Silveira, R Escada, ... Frontiers in microbiology 7, 1581, 2016 | 45 | 2016 |