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Yi Zhang
Yi Zhang
Assistant Professor, Duke University
Bestätigte E-Mail-Adresse bei duke.edu - Startseite
Titel
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Zitiert von
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Therapeutically increasing MHC-I expression potentiates immune checkpoint blockade
SS Gu, W Zhang, X Wang, P Jiang, N Traugh, Z Li, C Meyer, B Stewig, ...
Cancer Discovery 11 (6), 1524-1541, 2021
1422021
In vivo CRISPR screens identify the E3 ligase Cop1 as a modulator of macrophage infiltration and cancer immunotherapy target
X Wang, C Tokheim, SS Gu, B Wang, Q Tang, Y Li, N Traugh, Z Zeng, ...
Cell 184 (21), 5357-5374. e22, 2021
1202021
MYC drives aggressive prostate cancer by disrupting transcriptional pause release at androgen receptor targets
X Qiu, N Boufaied, T Hallal, A Feit, A de Polo, AM Luoma, W Alahmadi, ...
Nature Communications 13 (1), 1-17, 2022
912022
TISMO: syngeneic mouse tumor database to model tumor immunity and immunotherapy response
Z Zeng, CJ Wong, L Yang, N Ouardaoui, D Li, W Zhang, S Gu, Y Zhang, ...
Nucleic acids research 50 (D1), D1391-D1397, 2022
702022
Integrative Genomic Analysis Predicts Causative Cis-Regulatory Mechanisms of the Breast Cancer–Associated Genetic Variant rs4415084Regulatory Genomics of GWAS SNPs
Y Zhang, M Manjunath, S Zhang, D Chasman, S Roy, JS Song
Cancer research 78 (7), 1579-1591, 2018
412018
Molecular and cellular features of CTLA-4 blockade for relapsed myeloid malignancies after transplantation
L Penter, Y Zhang, A Savell, T Huang, N Cieri, EM Thrash, S Kim-Schulze, ...
Blood 137 (23), 3212-3217, 2021
362021
The cancer-associated genetic variant rs3903072 modulates immune cells in the tumor microenvironment
Y Zhang, M Manjunath, J Yan, BA Baur, S Zhang, S Roy, JS Song
Frontiers in Genetics, section Bioinformatics and Computational Biology, 2019
302019
Checkpoint blockade-induced CD8+ T cell differentiation in head and neck cancer responders
L Zhou, Z Zeng, AM Egloff, F Zhang, F Guo, KM Campbell, P Du, J Fu, ...
Journal for immunotherapy of cancer 10 (1), 2022
282022
Machine learning modeling of protein-intrinsic features predicts tractability of targeted protein degradation
W Zhang, SSR Burman, J Chen, KA Donovan, Y Cao, C Shu, B Zhang, ...
Genomics, Proteomics & Bioinformatics, 2022
222022
Topical therapy for regression and melanoma prevention of congenital giant nevi
YS Choi, TH Erlich, M von Franque, I Rachmin, JL Flesher, EB Schiferle, ...
Cell 185 (12), 2071-2085. e12, 2022
222022
Clonal tracing reveals diverse patterns of response to immune checkpoint blockade
SS Gu, X Wang, X Hu, P Jiang, Z Li, N Traugh, X Bu, Q Tang, C Wang, ...
Genome biology 21, 1-28, 2020
192020
Functional analysis of low-grade glioma genetic variants predicts key target genes and transcription factors
M Manjunath, J Yan, Y Youn, KL Drucker, TM Kollmeyer, AM McKinney, ...
Neuro-oncology 23 (4), 638-649, 2021
132021
MetaTiME integrates single-cell gene expression to characterize the meta-components of the tumor immune microenvironment
Y Zhang, G Xiang, AY Jiang, A Lynch, Z Zeng, C Wang, W Zhang, J Fan, ...
Nature Communications 14 (1), 2634, 2023
102023
ClusterEnG: an interactive educational web resource for clustering and visualizing high-dimensional data
M Manjunath, Y Zhang, Y Kim, SH Yeo, O Sobh, N Russell, C Followell, ...
PeerJ Computer Science 4, e155, 2018
92018
Tutorial: integrative computational analysis of bulk RNA-sequencing data to characterize tumor immunity using RIMA
L Yang, J Wang, J Altreuter, A Jhaveri, CJ Wong, L Song, J Fu, L Taing, ...
Nature Protocols, 1-11, 2023
82023
SequencEnG: an Interactive Knowledge Base of Sequencing Techniques
Y Zhang, M Manjunath, Y Kim, J Heintz, JS Song
Bioinformatics, bty794, 2018
82018
A community challenge to predict clinical outcomes after immune checkpoint blockade in non-small cell lung cancer
M Mason, Ó Lapuente-Santana, AS Halkola, W Wang, R Mall, X Xiao, ...
Journal of Translational Medicine 22 (1), 190, 2024
52024
Leveraging epigenomes and three-dimensional genome organization for interpreting regulatory variation
BA Baur, J Shin, J Schreiber, S Zhang, Y Zhang, M Manjunath, JS Song, ...
bioRxiv, 2021
52021
ABC-GWAS: Functional Annotation of Estrogen Receptor-Positive Breast Cancer Genetic Variants
M Manjunath, Y Zhang, S Zhang, S Roy, P Perez-Pinera, JS Song
Frontiers in genetics 11, 730, 2020
52020
scATAnno: automated cell type annotation for single-cell ATAC sequencing data
Y Jiang, Z Hu, AW Lynch, J Jiang, A Zhu, Z Zeng, Y Zhang, G Wu, Y Xie, ...
bioRxiv, 2023.06. 01.543296, 2023
22023
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